Rover is a tool to visualize and validate quantitative proteomics data from different sources. Manual validation of regulated proteins in quantitative proteomics has always been a tedious process. Rover is a Java based utility designed to facilitate this process.
Rover accepts quantitative data from different sources such as Mascot Distiller and MaxQuant. In an intuitive environment, Rover visualizes the quantitative data in such a way that the user can select and validate proteins in comparisons to the whole experiment and in the context of the protein inference problem.

Two diferent types of analysis can be performed in rover. The simplest one is the analysis of quantitative data. A second methods is also available where dierent source of quantitative data can be combined via location and scale normalization.

Statistics are used to compare and review the peptide ratios from the selected proteins with the peptide ratios from a reference set.

Requirements:
* Java

The license of this software is Free, you can free download and free use this application software.